Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------------------QTI---CNMPASGLMAC-----------KPAVTPPNPPPPTSTCCSALSQADMRC----------------LCSYKNSQ---LLPSLGIDPNLAMKLPSMCKLPHPANC
1K6K Chain:A ((1-142))
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGT-------
General information:
TITO was launched using:
RESULT:
Template:
1K6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21555 for 314 contacts (-68.6/contact) +
2D Compatibility (PS) -7234 + (NN) -3716 + (LL) 60
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -34745.0 ( -110.65 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1K6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K6K-query.scw
PDB file :
Tito_Scwrl_1K6K.pdb
: