Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCQQALTELIPCRPFLIAT---A--P-SP-----------TAPCCTGVSDVKAAASTTEARRDLCECFEKNAPGY-----G--V--K-PEKAKLLPGLCGVTVPVPIDPSVNCTTIT
1W2Q Chain:A ((23-113))
-------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME----N--TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRA--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29414 for 391 contacts (-75.2/contact) +
2D Compatibility (PS) -6359 + (NN) 822 + (LL) 1836
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -36815.0 ( -94.16 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: