Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCPEVSKALVPCVTYLATGSSFVHCCTQIRLLNSKANTTSDRQGVCRCLTSLAAQFQRRHRLNFNLVKQLPGKCNVNIRYNITTQNPNCSQVK
M039 Chain:A ((4-98))
LTCPEVSKALVPCVTYLATGSSFVHCCTQIRLLNSKANTTSDRQGVCRCLTSLAAQFQRRHRLNFNLVKQLPGKCNVNIRYNITTQNPNCSQVK
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21618 for 643 contacts (-33.6/contact) +
2D Compatibility (PS) -8946 + (NN) 1122 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 150
Total energy: -28392.0 ( -44.16 by residue)
QMean score : -0.020
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: