Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DSDQDKEECTQQLVALATCLPYVGGD-----AKAP----TPDCCSGLKQVLNNNKKCLCVIIKDRNDP---------------DLG--LNI--NVTLALALPSVCNAPANVSKCPG
1B1U Chain:A ((16-108))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49197 for 408 contacts (-120.6/contact) +
2D Compatibility (PS) -6110 + (NN) 3274 + (LL) 840
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -54293.0 ( -133.07 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: