Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YGPCGKHDIEKEAEKLAPCTKAAQYL------EAP---VSKRCCTVMEKKLKNPDCLCAIMFSH---TARS---------AG--------VNPEVAVTI--PKRCNIPVRPVGHKCGAFPLV
1BEA Chain:A ((16-109))
--------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32609 for 384 contacts (-84.9/contact) +
2D Compatibility (PS) -6387 + (NN) -3084 + (LL) 1036
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -44094.0 ( -114.83 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: