Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVNSAVGPCLSYARGTGASPSAACCNGVKSLAAAAKSSADKKAACACLKSAAGRMSGLNAGNAAAIPSKCGVSIPYTISPSVDCSRVN
M039 Chain:A ((1-93))
AISCGQVNSAVGPCLSYARGTGASPSAACCNGVKSLAAAAKSSADKKAACACLKSAAGRMSGLNAGNAAAIPSKCGVSIPYTISPSVDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60683 for 698 contacts (-86.9/contact) +
2D Compatibility (PS) -9953 + (NN) -5213 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 4650
Total energy: -90499.0 ( -129.65 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: