Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPADRMALKLAPCASAGQDPASAPSSGCCTAVHTIGKQSPKCLCAVMLSNTARSAGIKPEAAITIPKRCNLVDRPVGYKCGAYTLP
M039 Chain:A ((3-148))
AGECGATPADRMALKLAPCASAGQDPASAPSSGCCTAVHTIGKQSPKCLCAVMLSNTARSAGIKPEAAITIPKRCNLVDRPVGYKCGAYTLP
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9093 for 735 contacts (12.4/contact) +
2D Compatibility (PS) -9180 + (NN) -5238 + (LL) 0
1D Compatibility (HY) 2000 + (ID) 250
Total energy: -3575.0 ( -4.86 by residue)
QMean score : -0.054
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: