Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDACTGLPGLLNCAPFLLGS---V--S-SP-----------DAKCCKSLKWLSQHAINREDKRELCKCLKIEDLKH----KGVI-----LDRAKALPRLCKVQLPVPLIPDNKDCDKIKAADEE
1W2Q Chain:A ((23-113))
-------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME----N--TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRA--------------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18883 for 382 contacts (-49.4/contact) +
2D Compatibility (PS) -6871 + (NN) -4783 + (LL) 1584
1D Compatibility (HY) -800 + (ID) 550
Total energy: -30303.0 ( -79.33 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: