Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--QREPAKCGSSDAGS---VLMPCFAFL-----EQQSREPS-------ARCCSAVANSTQKEPPRCLCVFLDQL------ARAMNR--TQPLQLPSLCGDARLTAERCKGLFVANRFA
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL----DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQP---CQM--------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40448 for 480 contacts (-84.3/contact) +
2D Compatibility (PS) -7936 + (NN) -872 + (LL) 1628
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -51278.0 ( -106.83 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: