Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDCSAAQQAMFPCLSAAVGGNPPPPSVACCAAMKSVSKLEMCQCLVNQTSTVPGLNMTAARNIPANCNISAAADCS
M039 Chain:A ((2-104))
AVDCSAAQQAMFPCLSAAVGGNPPPPSVACCAAMKSVSKLEMCQCLVNQTSTVPGLNMTAARNIPANCNISAAADCS
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1198 for 537 contacts (2.2/contact) +
2D Compatibility (PS) -8292 + (NN) -7256 + (LL) 0
1D Compatibility (HY) 5200 + (ID) 600
Total energy: -9750.0 ( -18.16 by residue)
QMean score : 0.015
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: