Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------AVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQ-----------TTNDRRAVCTCIKNAVSQSGFSYT-NLNLNLAAGLPRKCGVNIPYQISPNTDCNSVH-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42755 for 494 contacts (-86.5/contact) +
2D Compatibility (PS) -9481 + (NN) -2891 + (LL) 32
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -57745.0 ( -116.89 by residue)
QMean score : 0.337
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