Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AIACNDLLETLYPCVEFITSPG-----FSDP-----------SSPCCDGIKRINDEAITTLDRQNVCKCLKPVVPVLP----GLNP-----DNFATLPDKCGVNLL--FSISPHMNCNKIN
1W2Q Chain:A ((22-121))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMEN------TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37941 for 438 contacts (-86.6/contact) +
2D Compatibility (PS) -7038 + (NN) 1905 + (LL) 1636
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -44888.0 ( -102.48 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: