Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---KKDLPFCNVELLPC---------------VLPFKVRGHGSKLPNGCCEKMKKSTSCMCRFLMAKERDLNAAAH-RIFWFCKISVPNCPKI-------------
2HFT Chain:? ((1-106))
SGTTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKC----FYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTEPLYENSPEFTPYLET
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10845 for 361 contacts (-30.0/contact) +
2D Compatibility (PS) -7598 + (NN) 1494 + (LL) 432
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -19767.0 ( -54.76 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: