Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYTRLMIQVHSYVPFCAYTYDYFSYCLDFLTG----YYYK-----PGKKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYT--------------PP--ML----ADKIQQLPLLCNTHLSFPISSSMDCSTV
1B1U Chain:A ((15-108))
--------------------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------P-AYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50593 for 400 contacts (-126.5/contact) +
2D Compatibility (PS) -6388 + (NN) -1835 + (LL) 2940
1D Compatibility (HY) -800 + (ID) 450
Total energy: -57126.0 ( -142.81 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: