Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MADNLYLYKGSVKITEMTLNLNEAK---IIVYEDSGGNKYTLDASGISTLTNIDDIKLSDLLEGKVKFIYQ--------------KKDSNAIQIKGLGNIISTLLATQKAVDGESILAEEVSKKPVVDTILKATDLVNLNKNIVETELEDKFVKKDASNLTDAVNQKAFAEKILPAKDGQKSILVEKLGGLLGEPG------------AVYGDSNPKITAKDFLAEKASLVKTDGSNIVTQTDKGKALV------EAILNAKEPISNKEVKIVETELAKTFVKTADLGTPAVAG--------------KVLDAKDGQ---KSILVEK---LGRFLDTTSTEYSNQTAKVFSGE-------KGTKPTAEEVVTKLLANNKKDLTDEVAQ-----------------------------------NPGLRAAVTSNSGLR----------GTVIDNL-------------------KGDTDFKTDITIQVDAK---DPAFQGFVREIISQPSFEIPTSDDAPLSWDWI |
| 1WAJ Chain:? ((376-903)) | QNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVMSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQHLMFMDREAIAGPPLGSKGIGGFWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPKAVQKALKECIRRMLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPKCPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWMDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLFDMFDF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 45781 for 2485 contacts (18.4/contact) +
2D Compatibility (PS) -41177 + (NN) -5505 + (LL) 204
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -13747.0 ( -5.53 by residue)
QMean score : 0.212
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