Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELISNLIHQLGGGIYNFLSFSLIISVIVFVHEYGHYIIAKAYKVKVESFSIGFGPGIFGFYDKSGTRWKLSAIPLGGYVKMLGDNNAANTPIDQQELTEEEKSYSLHTKPRYQKAAIVFAGPFANMIFAIIALTVFFSVVGYYHTPPVIGKVIEGSAAKQAGLLPGDTITQINEYKIKYFEDISRVMMSNPETKIEIKYSRNNEEYSTSLTPLTIEDKDIFGNIIERKTIGITSVNIKELRQSSFFGAVSLSVSETYHTMCLTIKALFQIIVGKRSVNEIGGPIKIAKYSGQSAKKGFIMVLYFMAIISANLAAINLLPIPLLDGGHLFHYIIEAVIRRDLSLKYQKYAATFGASVLFLLMAIAISNDIRHLF |
1LCY Chain:A ((257-320)) | --------------------------------------------------------------------------------------------------------------------------------------------------GVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT--QSQLAVQIRRGRETLTLYVTPEVTE------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21783 for 408 contacts (-53.4/contact) +
2D Compatibility (PS) -6757 + (NN) -3017 + (LL) 23152
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -13055.0 ( -32.00 by residue)
QMean score : 0.389
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