Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLSQYYLPTLKEKPAHARIISHQYSLRAGLIKQIASGIYTWLPLGLRVLKNIEGIIRDEMNKSGAIEALMPCVQPASLWRESGRYDDYGKTMLRIRDRHEEDMLFGPTHEEVATDLIRDIVKSYKNLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFNVNYESALNSYNLMYKTYIKIFKRMGLIPIGVRADTGLIGGNLSHEFHILASTGESTLYY-DNKFFELLESEDV---KSL-------KS-IYAVADDIHDP-KTCPVPQ-EQLNVSKGIEIGHIFYFGDKYSKPMNAKVTAQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGITWPEAVAPFRVGLINLQTKTAEYVEIANKIYSTLKS--DEVLYDDTEGSIGVKFAKMDLIGLPWQIIVGKKAVSENIIEIKNRATGKVEEVQIEEAINYFNVK |
| 2I4L Chain:A ((1-436)) | MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDV-LNLPVPDENVDYDGDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDGARENLALADVVAR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257645 for 3507 contacts (-73.5/contact) +
2D Compatibility (PS) -44443 + (NN) -8684 + (LL) 440
1D Compatibility (HY) -37600 + (ID) 11400
Total energy: -359332.0 ( -102.46 by residue)
QMean score : 0.496
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