Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQQEMITINAELRDVTKTKAIRSLRKKGNIPAVVYGKGHNNVNLTLSAKEFTKQYKLGFLSAHVIELDISGKKEYALVRDIQWHVVKDTIQHVDFQFVDKGSEIKIDIPLSFVNESKSPGIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISDVKLPGGVKLAAHEEENFTVVTISAADSGVEESQVETTEE
1FEU Chain:A ((1-185))
----MEYRLKAYYRE---GEKPSALRRAGKLPGLMYNRH-LNRKVYVDLVEFDKVFRQASIHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLS-DEPVEMYVPLRFVGTP--AGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEE--TIAAVVPPEDVEKLAE------
General information:
TITO was launched using:
RESULT:
Template:
1FEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94223 for 1328 contacts (-71.0/contact) +
2D Compatibility (PS) -19860 + (NN) -4897 + (LL) 1612
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -132268.0 ( -99.60 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1FEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FEU-query.scw
PDB file :
Tito_Scwrl_1FEU.pdb
: