Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVTFGCRLNFYESELIKEALRKAERENVVVVHSCAVTNEAERQVKQKIRKIYKNDPNKEIIVVGCAVQLDPESYSNIPGVSKVLGNQDKLKTENYLLSNNKILVNDNQASKSEPALIDKFKDKSRAFIEVQNGCDHSCTFCSITEARG-NNRSVPINNIIEQIKIFVA-NGYQEVVFTGVDITDFGTDLFGKPSLGLMVRRVLKDVPELKRLRLSS----IDVAEVDDELMDLIVNESRFMPHLHLSLQSGNNLILKRMKRRHSREQVIEFCHKVKSLRSNIAYGAD-IIAGFPTETDEMFQDTVNLLEETNTVYLHAFPYSKRKNTPAARMPQVPENVRKERVKNLRKINKAMMSNFYQSLIGTKQSVLVEQNNIGRAENFALVKFTSKIQAKSIVKATIIGMESGYLVGSIIP |
| 2A5H Chain:A ((112-302)) | ---------------------------------------------------------------------------------------------------------------------------RYPDRVLLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDE-----TLEYIIAKLREI-PHVEIVRIGSRTPVVLPQRITPELVNMLK--KYHPVWLNTHFNHPNEI----------TEESTRACQLLADAG--VPLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHTSGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTYSEPINYTPGCNCDVCTGKKKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103064 for 1366 contacts (-75.4/contact) +
2D Compatibility (PS) -19425 + (NN) -8353 + (LL) 9916
1D Compatibility (HY) -10800 + (ID) 1350
Total energy: -133076.0 ( -97.42 by residue)
QMean score : 0.441
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