Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIDFNIINNMININTKRQITGFFVYIIGFSGSGKLSTAIELSNMI---DALIVNS----------NFSNNTQVCSIYDNVFEHNHIPEEVQD-R-IYN-IAQIMLQAIEAYLIHSKNYIFIDELMKNND-------HNTKMYNSVVELSKRMNTQILPIVLRCDLLTLQKRIKLKRQRENKKATNISSIIENFRTH-DSFIP-PNAIEIENSNMSIKEVAEKITSQMHKLSQINSIYTKG |
3LV8 Chain:A ((26-232)) | --------------------NAKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVK-----EEHPGEEL-QDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQTALGDFKPDLTLYLDIDPKLGLER-----ELDRIEKMDISFFERARERYLELANSDDSVVMIDAAQ-SIEQVTADIRRALQDWLSQVN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66421 for 1227 contacts (-54.1/contact) +
2D Compatibility (PS) -19356 + (NN) -8595 + (LL) 2716
1D Compatibility (HY) -1600 + (ID) 1150
Total energy: -94406.0 ( -76.94 by residue)
QMean score : 0.419
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