Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLLASLPEG--HTIIGLQFENLMLNNRKSIPNILGIDEIISENLFFQRKTG---------NSAIYQIDYIIRTKFNTLYIC------EIKFSKNRIGHSIM---------------
2HJQ Chain:A ((1-111))
-MFTAKLIKGKTYNVMGITFRA---GVSQTVP--KKLYEYLNENPYFILTQELNNQKDDPINYTESELKGMNKAEHESIISNLGRNPSDFKNADERIAYILKQIDNKGELEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2HJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35004 for 462 contacts (-75.8/contact) +
2D Compatibility (PS) -7923 + (NN) 5484 + (LL) 892
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -40051.0 ( -86.69 by residue)
QMean score : 0.079
(partial model without unconserved sides chains):
PDB file :
Tito_2HJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJQ-query.scw
PDB file :
Tito_Scwrl_2HJQ.pdb
: