Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFIDEVKLYLKAGDGGDGCVSFRREKFVEFGGPNGGNGGKGGNIVFVSDANLNTLLNFRYRRHVKAGSGKSGASRDRSGTAGKNIVLKVPVGTQIIDEESEKIILDFNKPDMEFLIAQGGKGGLGNTNFKSSINRAPRHFTCGQFGEEKYVVLKLKVLSDVGIIGMPNAGKSKFLTRCSNADT-KVGDYPFTTIKPHLGVAKVDNSEVVIVDIPGIITDAHL-GIGLGHKFLKHVERCKILLHLIDVTHDNVVSAYNCMRNELELYNSDLVKKEEIIVLNKCDLLRKVEIFEKKNHLANYLNKEVLCLSI--GEDLQPILRLLNEKLKKGSSKKVDVYDPFKR |
| 1WF3 Chain:A ((6-174)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------YSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPED-ELVARALKPLV---GKVPILLVGNKLDAAKYPEEAMKAYH-ELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPEDYAKSDQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82297 for 1314 contacts (-62.6/contact) +
2D Compatibility (PS) -17220 + (NN) -2181 + (LL) 6316
1D Compatibility (HY) -4400 + (ID) 1800
Total energy: -101582.0 ( -77.31 by residue)
QMean score : 0.440
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