Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQG-IV--------LDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAIRP---------LKDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPVTEPEGSMVVDIGGGTTEVAIISLGGIVY-----SRSARVGGDIMDEAIRSYIRENHKLLI-------------GETTAEKIKKSLGSASLPDENNKEWMMVKGR--DLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKLPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 2V7Y Chain:A ((2-352)) | ---------------------SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNG---E--RLVGEVAKRQAITNPNTIISIKRHMGTDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQ------TQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTP-ADI--DKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134791 for 2605 contacts (-51.7/contact) +
2D Compatibility (PS) -33754 + (NN) -11664 + (LL) 1260
1D Compatibility (HY) -6000 + (ID) 4200
Total energy: -189149.0 ( -72.61 by residue)
QMean score : 0.482
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