Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVSSDTELIKSTIMSIIDQNKGRDIVTFD-VQNKTIIAKYMIIASGDSSRHVKALAEHVMKSLKQ--YYKMDVEGMDEGNWVILNFQGIMVHIFRPEVREYYKIEELWN------
2O5A Chain:A ((2-114))
------SNQELLQLAVNAVDDKKAEQVVALNMKGISL---DFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWPTVELEG
General information:
TITO was launched using:
RESULT:
Template:
2O5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79196 for 747 contacts (-106.0/contact) +
2D Compatibility (PS) -11060 + (NN) -8222 + (LL) 960
1D Compatibility (HY) -8800 + (ID) 1150
Total energy: -107468.0 ( -143.87 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_2O5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O5A-query.scw
PDB file :
Tito_Scwrl_2O5A.pdb
: