Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------MNMYRVLLVLALLTSSNLNALINYSKPISVDSRIK---TFVYSPNEVFTVIFSQGYYSYIEFAEGEKVKNIAVGDASSWRISPYDNKLLIMPFEVSSRTNMIITTTKKRNYIFDLISRPNYDKYPDTDAEKVSHDYSAEKDISYVVRFYYPKEEDEFDIDLDEISAPTQMQYVVDRPEKIIQENDTKYNYTYIDEGGNADMIPIELFDDGYLTYFKFRDSNKIPQIFAKDGKTRLPCKRLLFDGYVIIKGVHKKLFMRYENDEVEIINRSL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4WD9 Chain:A ((5-1006)) | SFKAQPFLVRNTILCPNDKRSFTEYTQVIETVSKNKVFLEQLLLANPKLYDVMQKYNAGLLKKKRVKKLFESIYKYYKRSYLRSTPFGLFSETSIGVFSKSSQYKLMGKTTKGIRLDTQWLIRLVHKMEVDFSKKLSFTRNNA-NYKFGDRVFQVYTINSSELEEVNIKYTNVYQIISEFCENDYQKYEDICETVTLCYGDEYRELSEQYLGSLIVNHYLIS-----NLQKDLLSDFSWNTF-LTKVEAIDEDKKYIIPLKKVQKFIQEYSEIEIG------EGIEKLKEIYQEMSQILE---------------NDNYIQIDLISDSEI-NFDVKQKQQLEHLAEFLGNTTKSVRRTYLDDY------KDKFIEKYGVDQEVQITELFDSTFGIGAPYNYNHPRNDFYESEPSTLYYSEEEREKYLSMYVEAVKNHNVINLDDLESHYQKMDLEKKSELQGLELFLNLAKEYEKDIFILGDIVGNNNLGGASGRFSALSPELTSYHRTIVDSVERENENKEITSCEIVFLPENIRHANVMHTSIMRRKVLPFFTSTSHNEVLLTNIYIGIDEKEKFYARDISTQEVLKFYITSMYNKTLFSNELRFLYEISLDDKFGNLPWELIYRDFDYIPRLVFDEIVISPAKWKIWGRDVNSKMTIRELIQSKEIPKEFYIVNGDNKVYLSQKNPLDMEILESAIKKSSKRKDFIELQEYFEDENIINKGEKGRVADVVVPFIRAFIREKRVSVERREKLPFNEWLYLKLYISINRQNEFLLSYLPDIQKIVANLGGNLFFLRYTDPKPHIRLRIKCSDLFLAYGSILEILKRSRKNRIMSTFDISIYDQEVERYGGFDTLELSEAIFCADSKIIPNLLTLIKDTNNDWKVDDVSILVNYLYLKCFFQNDNKKILNFLNLVGDQIFYDKNFKELKHAIKNLFLKMIAQDFELQKVYSIIDSIIHVHNNRLIGIERDKEKLIYYTLQRLFVSEETKDFNLDLVSVSK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -57941 for 1379 contacts (-42.0/contact) +
2D Compatibility (PS) -24187 + (NN) 969 + (LL) 1728
1D Compatibility (HY) -10000 + (ID) 2100
Total energy: -91531.0 ( -66.37 by residue)
QMean score : 0.106
|
|
|