Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGIPNKLDPHEPENLAKAIKKLNLKYVVITSVDRDDLPDGGASQFIKCIEEIRKITPETTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMVPRLYARIRPRARYFHSLYLLKMVKQINPKLLTKSGLMVGLGETKEEVLQVMDDLRSAEVDFITIGQYLQPTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR |
| 3IVS Chain:A ((58-199)) | ----------------------------------------------------------------------------FDTEKKIQIAKALDNFGVDYIELTSPV--ASE-----QSRQDCEAICKLG--LKCKILTHIRC-HMDDARVAVETGVDGVDVVIGT----------TYIIDSATEVINFVKS--KGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSILGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52275 for 939 contacts (-55.7/contact) +
2D Compatibility (PS) -13979 + (NN) -5731 + (LL) 5276
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -72559.0 ( -77.27 by residue)
QMean score : 0.409
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