Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKIIISFSIALLLIFCFFIFFKGESPLEINISYINFYVKSKISKTFANSDVDIGSTSVILQKDGKDPYLVITNLKIVNSGFIIEAPNLFVHFKLSSLFRANVKISQVLADSVCAYVDQEKAGFKVVDFDLKNSLKAVREFFFDLNTGSRIEITNIAINKSTEGELFIDELYIGKREDFNVLDIRVHTKDEKGFLDDLSITIKNRNGLLNVYGIFYNLKLKLFSEFSTLIKNYNLGKNIGFKGNFSMRISGKNEIIDGNVYILNTENRVNKNLAITNVNINLTYSDGVIGVKNFHFNLNGTYLSLMGKMNFSANHALFRVNISKFAAKDLCTYVPDYI-----INS--EFKSWYCDNIDGNILNVIVSFNGKINNLINNDLSDVIVVADIENGSVKFDEDFEQVRELSGDLVLKNDSLKITVNSAKFQNFTINGCNIEMNSLDREDSVLTINGQAVSDAYGLYEPIKFKLDDVIKVEKNKIGGAAKSVFNFRVFNINADDKEVNFSAKFHSEIDNLVIYDANLGRYDIKLDFGSDFIDLNGSGIVNNTQLLFDLKSSNKNESFTWSLTGDLPAQILNFNGGYFNANIESVINQDKTGYVNGNVDLSEFELRSSYLGWKNRFEDHNKILFSVKLKGANRLLIDRLDVIGSDLDIKFSGRVENGDLYLNTSSFKLPNNDLSIEIKSSKGKNIINVCGEKINLSDVLDLLGKNDSGLSNNVEVSMNVDNVIMKEGIVIKDASLNISCTKGNCNGSQFTGQFLEDNSNILAEYSEIGLEIHADNSGMLLRSLGISKSVKNGKLSFYLSPQRESGEHYGMLSIGNFYIKDAPLLTTLLSMSSLPGIVNTIKNEGVYFYKYNAPFSHKDGTVEIEESWLEGAELGISTSGKLDIRGYKFQVEGQVIPAYSINKSLLKIPIVGKLLTGGKSRGIISIDYKASGDDKNSNIFVNFISSLTPSLLKRLLGVFDRAMTKANEAITNSLKGGMKKKFSSV |
2ARE Chain:B ((118-183)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NTSANQVI-AVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLNVLVTFNPSTRNLDVVATYSDGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSFTSTLLYT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ARE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18241 for 238 contacts (-76.6/contact) +
2D Compatibility (PS) -6390 + (NN) -1267 + (LL) 49768
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: 19820.0 ( 83.28 by residue)
QMean score : 0.125
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