Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------MKRTQYNNLVSSYARALFL-VSENKLSVVRKEV-EFLLAFFKSQHDVFIYLSHPMI-SFARKKEVIFSVNEHLSESLVKFIA-VIFANKRSNLLISVLEKFLTLVRESENELEITIKSAETLSESNIK---IITESLSFLGKIVRVDNAVDP---------SILGG-------FIVKYGFNLIDASLKSYLDRLVDLSKVEILKTRNFI---------------------- |
| 4L4W Chain:A ((1-267)) | GHMGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFVLLRGMVARRSEETVVALRN---AQLVTFTAMDI---GHQHALVPVLTAGLSGRKPARFDDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHPTKAFDGEWISTFTPGSADAIAMAVERLTASLPSGSWF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54093 for 1101 contacts (-49.1/contact) +
2D Compatibility (PS) -18072 + (NN) 8003 + (LL) 388
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: -66574.0 ( -60.47 by residue)
QMean score : 0.173
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