Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFSSLQDKGMKNSEFLKGEVSFEQKAKILLEALSSIPNFVGETFVIKCGGITISDETLFNTFVHNVVLLKQLGINPVIVHDGEYEIDSVLKILGINSKFVNDIRLTDKDTMRIIEMVLCGSINKKIVQHINSAGGSAIGLCGKDGNLIKAEKISTTLRENGSNNVEKILDMGFIGIPTEINPDILFFIEESDFIPVIAPIGHGKNGETYHIDADGAAGAIAVAVSASKMIIFSD---VCEEMDKIDG--RKISVKNLNASINCGKIKGERFVEKLTACAKMVEECAGIAHIVNGRIPN-IMIDLFTESNSSVSIVNDL |
| 2JJ4 Chain:B ((28-309)) | --------------------AGAADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLAR----------PHDQEGI---GFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELIAQG-IVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219387 for 2309 contacts (-95.0/contact) +
2D Compatibility (PS) -29827 + (NN) -9024 + (LL) 1704
1D Compatibility (HY) -26000 + (ID) 4950
Total energy: -287484.0 ( -124.51 by residue)
QMean score : 0.501
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