Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLVVTLPFMIFFNNEVGNYKVQFSYGCVYYATNEYVHAGDKFYSNYFIDSHYGREINMYPQSELLAKGYVGNTLPILISLDKDLIK
1GH9 Chain:A ((1-71))
MYIIFRCDCGRALYSREGAKTRKCVCG-------RTVNVKDRRIFGRADDFEEASELVRKLQEEKYGSCHFTNPSKRE---------
General information:
TITO was launched using:
RESULT:
Template:
1GH9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32148 for 409 contacts (-78.6/contact) +
2D Compatibility (PS) -7497 + (NN) -812 + (LL) 1256
1D Compatibility (HY) 1600 + (ID) 500
Total energy: -38101.0 ( -93.16 by residue)
QMean score : 0.058
(partial model without unconserved sides chains):
PDB file :
Tito_1GH9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GH9-query.scw
PDB file :
Tito_Scwrl_1GH9.pdb
: