Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFGLHHFNYTLKKNKNDVAKAL------------FEYGAKIDVDYVEERLIISGTTEYSQSTVEILLPYASI
2G2K Chain:A ((34-86))
----------TVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGS--HEANKLQDMLDGFIK
General information:
TITO was launched using:
RESULT:
Template:
2G2K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3323 for 199 contacts (16.7/contact) +
2D Compatibility (PS) -4279 + (NN) -737 + (LL) 924
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -4719.0 ( -23.71 by residue)
QMean score : 0.245
(partial model without unconserved sides chains):
PDB file :
Tito_2G2K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G2K-query.scw
PDB file :
Tito_Scwrl_2G2K.pdb
: