Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKEDLLELMKIRHSRRSYGQSKLAHQEEINMLIETAWLSPSRYGDEPWRQVICNRQSNQDAWEKLLSCPTE---PNQKWAKDTQILIISLSTKNFHD--H--T----------------------------------KIVNFWGSHDTGIANYTFMLQSYIYEFNAHQMSRFDRNKIVKNSIYQMILI
1ICR Chain:A ((2-176))
-----DIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTE---EGKARVAKSAAGNYVFNERKMLDASHVVVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGLKEKGY
General information:
TITO was launched using:
RESULT:
Template:
1ICR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27568 for 877 contacts (-31.4/contact) +
2D Compatibility (PS) -14679 + (NN) -9897 + (LL) 564
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -54230.0 ( -61.84 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_1ICR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ICR-query.scw
PDB file :
Tito_Scwrl_1ICR.pdb
: