Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGVVFSGTQPSGVLHLGNYLGAIKQWVTLQDKYKSIFCIVDLYAITANKLSASELKSNIFKTAAAYIACGIDPEKSIIFNQSTISSHTELSWLLGCYTPVGWLNRMTQFKDKAGSDKQKASLGLYSYPVLMAADILLYRTKYVPVGDDQKQHLELARDIALAFNNHYKLGHFVIPEILVLDHASRIMSLRDGTSKMSKSPPSEYSCINLDDTDDLIVKKVGKAKTDSILGFDFATLKCRPEISNLINIYSVLSNLDVDKVCEEMNKYDMQHFKGELADLIISVISPIREEINDLLKDQSHLYRVLKKGTEKAAEIVGHNIKEIKNIIGFVQ |
| 3PRH Chain:A ((2-327)) | -KQTIFSGIQPSGSVTLGNYIGAMKQFVELQHDYNSYFCIVDQHAITVPQDR-LELRKNIRNLAALYLAVGLDPEKATLFIQSEVPAHAQAGWMMQCVAYIGELERMT-----------AVVSGLLTYPPLMAADILLYGTDLVPPGEDQKQHLELTRNLAERFNKKYND-IFTIPEVKIPKVGARIMSLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKFDK-ENKPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQDRYYELIES-EELDRILDEGAERANRTANKMLKKMENAMGLGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212730 for 2540 contacts (-83.8/contact) +
2D Compatibility (PS) -33293 + (NN) -13207 + (LL) 832
1D Compatibility (HY) -24400 + (ID) 6700
Total energy: -289498.0 ( -113.98 by residue)
QMean score : 0.553
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