Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSNTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDIL--KNNIKIDYPYVLKPINEGSSIGVHITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEAAGTMEIRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
| 3R5X Chain:A ((2-303)) | --------------NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLGFPLVVKPNS----VGVKIVYDKDELISMLET----------------VFEWDSEVVIEKYIKGEEITCSIFDGKQLPIISIRHAAEFFDYNAKYDDA-STIEEVIELPAELKERVNKASLACYKALKCSVYARVDMMVKD--GIPYVMEVNTLPGMTQASLLPKSAD-AAGIHYSKLLDMIIETSLRVRKEEG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120119 for 2378 contacts (-50.5/contact) +
2D Compatibility (PS) -32329 + (NN) -12617 + (LL) 3716
1D Compatibility (HY) -23600 + (ID) 4850
Total energy: -189799.0 ( -79.81 by residue)
QMean score : 0.360
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