Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIDLSLPELPVLYPRITVVGVGGAGGNAVNNMIQSNLQGVNFVVANTDAQALEKSLCDKKIQLGINLTKGLGAGALPDVGKGAAEESIDEIMEHIKDSHMLFITAGMGGGTGTGAAPVIAKATREARAGVKDKASKEKKILTVGVVTKPFGFEGVRRMRIAELGLEELQKYVDTLIVIPNQNLFRVANEKTTFSDAFKLADNVLHIGIRGVTDLMVMPGLINLDFADIETVMSEMGKAMIGTGEAEGEDRAISAAEAAISNPLLDNVSMKGAQGILINITGGGDMTLFEVDAAANRVREEVDENANIIFGATFDQAMEGRVRVSVLATGIDCSVTHDNKQETSSVNQDETSEEKKFEWSYSQTLLPEAKQAEQVSEGVKWSSNIYDIPAYLRRKK |
1OFU Chain:B ((25-316)) | ---------------------------NAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEV------------AKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQFASEHATVKVGTVIDADMRDELHVTVVATGLG---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166415 for 2562 contacts (-65.0/contact) +
2D Compatibility (PS) -32235 + (NN) -13759 + (LL) 5960
1D Compatibility (HY) -24400 + (ID) 7400
Total energy: -238249.0 ( -92.99 by residue)
QMean score : 0.519
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