Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDNIIIITGITASGKSELCDNLIKKYGNISIVNCDSKQVYKEIPIITAQPPKQE---EFYRLYGCVPAKENYSVGLWLEDLKGEVDHALENARMPIITGGSGLYISSLINSLSPIPKVSE----EIRKNVSELRKNLSKEEFYKLVLSKDSKIQGKISTNDLHRLSRALEVITATGKSIFVWQESRQLPLFDN-FKIYTILPKREDVYRKINSRFVTMIESGAVDEVKKLLNMNLAPHLPAMRAHGVPEIIKYLKGKITLSEAIQIAQTNTRHYAKRQYTWFKNQFPNSEVIDCANKLIEFEIF |
| 3D3Q Chain:A ((6-297)) | -KPFLIVIVGPTASGKTELSIEVAK-KFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYEFKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFE--ISEDKMKQVKLKLK-ELEHLNNNKLHEYLASFDKESAKDIHPNNRKRVLRAIEYYLKTKKLLSSRKKVQQF-TENYDTLLIGIEMSRETLYLRINKRVDIMLGHGLFNEVQHLVEQGFE-ASQSMQAIGYKELVPVIKGNISMENAVEKLKQHSRQYAKRQLTWFKNKMNV-HWLNKERMSLQMMLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14224 for 1944 contacts (7.3/contact) +
2D Compatibility (PS) -27251 + (NN) 1483 + (LL) 152
1D Compatibility (HY) 16000 + (ID) 1500
Total energy: 3108.0 ( 1.60 by residue)
QMean score : 0.116
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