Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHASTGKGSKIKYSRVLFKISGEALMGSRPFGHDMELIDQLCKDISDIYKLGVQVCIVVGGGNIFRGASASLSGC-ERASSDYIGMLATIINALILQNFLEKNSVNSKVLSAIPMVTICEPYIRRKAIHHLEKGRVVIFAAGTGNPFFTTDTAAALRAVETNCDAILKGTQVNGVYSADPKKNEDAVMYDRLSYMDLLTRDLKVVDASAISLARENSIPIIVFSL-KEEKIVNIVK-GHGTYTIVSDCE
4A7X Chain:C ((7-239))
------------NKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAAQGGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTRVQSAIEIKEICESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMVK---
General information:
TITO was launched using:
RESULT:
Template:
4A7X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -219141 for 1926 contacts (-113.8/contact) +
2D Compatibility (PS) -25685 + (NN) -13980 + (LL) 396
1D Compatibility (HY) -24000 + (ID) 5950
Total energy: -288360.0 ( -149.72 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_4A7X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A7X-query.scw
PDB file :
Tito_Scwrl_4A7X.pdb
: