Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKM-----LSSEGLAQELNQRMTQGQSDFVFVIGG-SNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK
3ILK Chain:A ((76-135))
----------------------------------------------------------------------SLVIGTSARLRHLQNTLIEPRECAEKVVA----YKGKIAIVFGRERIGLTNEELLKCHYHLNI--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ILK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20893 for 302 contacts (-69.2/contact) +
2D Compatibility (PS) -6024 + (NN) -4123 + (LL) 9876
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -25314.0 ( -83.82 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_3ILK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ILK-query.scw
PDB file :
Tito_Scwrl_3ILK.pdb
: