Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQSIPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEVRIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEV-EGIDELYQHIKPLGILHPNTSLKDQ-WWD-ERDFAVIDPDNNLISFFQQIKS
3HUH Chain:A ((24-143))
--IDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNRKALIFGAQKINLHQQEMEFE------P----KASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQY---
General information:
TITO was launched using:
RESULT:
Template:
3HUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64879 for 791 contacts (-82.0/contact) +
2D Compatibility (PS) -12684 + (NN) -2324 + (LL) 772
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -84565.0 ( -106.91 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_3HUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HUH-query.scw
PDB file :
Tito_Scwrl_3HUH.pdb
: