Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MQLQTMSNSIFI--------KNLIFAI---NESLEYSETNSVMEVTFQKAIGFTQY---NFEGEKLKLKDDLKELISL-----VGREEAVLIFVNRLNEGL-------YCILNQLIEWDNLNYQFAMYKEAMHNYLFNTIEKLNDDTLFLLHQDGLITLPE--------HKYKTVAVKSTFGSRDFTFRFKFPEES------------------------DTVNTHQMLNKAISI------------TGSLANTHLEQ---PQKYKAHFKKIPIETKNLTS |
| 4TRQ Chain:B ((1-286)) | GKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKMVKWGPLRPFLSQETIDNWSVLYKHVRYGNIQGVSLWLRQNERHLCARQLLIVLLEKLPMVTYRNLIKTVIKSWTTEWGQNKLPYSLIERVLQLSIGPTFEDPGAQEITIYNGIHSPKNVENVLVTLINLGLLRANCFPQLQLCVVKKTTMIQEIVPPVNERITKMFPAHSHVLW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2210 for 1365 contacts (1.6/contact) +
2D Compatibility (PS) -21942 + (NN) -9393 + (LL) -28
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -40053.0 ( -29.34 by residue)
QMean score : 0.150
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