Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMCKLEWDDEINF----GKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPRE-------HTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRALANFDIN
3B0P Chain:A ((182-294))
---PLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLKG----TPPWAVLRHMLNLFRGRPKGRLWRR-
General information:
TITO was launched using:
RESULT:
Template:
3B0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29717 for 598 contacts (-49.7/contact) +
2D Compatibility (PS) -10868 + (NN) -7349 + (LL) 844
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -51290.0 ( -85.77 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_3B0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B0P-query.scw
PDB file :
Tito_Scwrl_3B0P.pdb
: