Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIPPQRQLAIQYNVNRVTIIKSIELLEAEGFIYTKVGSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIETDDSYIHISKGELGISLMPHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERMS-KQGINVGRENVMITSGALHAIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHIDVPYNQINEINTIIDRFINF---KNKAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPIIEDDIFRDI-FFSDPTPAIKTYDKLGKVIHISSFSKTIA-PAIRIGWIVASEK-IIEQLADVRMQIDYGSSILSQMVVYEMLKNKS--YDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKID-IDIKYLFYELLSKEKILINPG-YIYGSKEKSIRLSFAFESNENIKHALYKIYTYVKKV |
| 1B5P Chain:A ((30-382)) | --------------------------------------------------------------------------------GVDLVALTAGEPDFD--TPEHVKEAARRALAQ---GKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVV-NSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPG-RVAP-EHTLTVNGAAKAFAMTGWRIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALT-NQEASRAFVEMAREAYRRRRDLLLEGLTA-LG--LKAVRPSGAFYVLMDTSPIAPDEVRAAERL-LEAGVAVVPGTDF--AAFGHVRLSYATS-EENLRKALERFARVL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202410 for 3031 contacts (-66.8/contact) +
2D Compatibility (PS) -37423 + (NN) -20071 + (LL) 8276
1D Compatibility (HY) -9200 + (ID) 3300
Total energy: -264128.0 ( -87.14 by residue)
QMean score : 0.498
|
|
|