Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMG-TTEIKGKPKRVVTLYQ-GATDVAVSLGVKPVGAVESWTQ-KPKF---E-YIKN-D--LKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFK-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA-GGYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWT-SSKEW-KNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK |
| 3BE6 Chain:A ((2-293)) | -----------------------------------PVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGT-ADIDIEAIVAAKPDLIITEPTRN-TPIERLEKIAPTVSIDHLKGGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDS---QK--ITVSVIQANQGKINVMHSYHSLGRVLRDAGFRFPPLIESI---PEGGRMDVSAERLPELDADFVFATWRGDTGG--K-PQDELATMEKVMPGWCQFLTACRSGRYV-LISREEAISNSFA-SLGLMAAQIQSQIAGRPL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27914 for 2225 contacts (-12.5/contact) +
2D Compatibility (PS) -29932 + (NN) -14930 + (LL) 3056
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -80820.0 ( -36.32 by residue)
QMean score : 0.470
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