Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISIMDVHK----EVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
| 1OMO Chain:A ((1-320)) | --METLILTQEEVESL--ISMDEAMNAVEEAFRLYALGKAQMPPKVYLEFEK------GDLRAMPAHLMG---YAGLKWVNSHPGNPDK-GLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCGTQAYFQLEALRRVFD-IGEVKAYDVREKAAKKFVSYCEDRGIS----ASVQPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVEILKKAKIVVDDLEQAKHGG-EINVAVSKGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDSTGLAIQDVAVAKVVYENALSKNVGSKIKFF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -173126 for 2821 contacts (-61.4/contact) +
2D Compatibility (PS) -34210 + (NN) -17410 + (LL) 988
1D Compatibility (HY) -17200 + (ID) 5200
Total energy: -246158.0 ( -87.26 by residue)
QMean score : 0.506
|
|
|