Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQY-----DKILLYSGNMGQLQDMETLISFL-KLNKDQPQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTH--SSKELHEMGERAHQLFKDKYTREINTMKYYNLLK---- |
3OKP Chain:A ((4-381)) | --SRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFAS------TQNAEEAHAYDKTLDYEVIRWPRSVMLPT----------PTTAHAMAEIIREREIDNVWFGAAAP----LALMAGTAKQAGASKVIASTHGHEVGWSM--------LPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAF--GSHPTFEHLPSGVDVKRFTPAT--PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVS-QNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164364 for 3170 contacts (-51.8/contact) +
2D Compatibility (PS) -39400 + (NN) -14536 + (LL) 2484
1D Compatibility (HY) -3200 + (ID) 2550
Total energy: -221566.0 ( -69.89 by residue)
QMean score : 0.436
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