Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
2SNS Chain:A ((1-141))
-------------------------------------------------------------------------------ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFNKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
2SNS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40721 for 1093 contacts (-37.3/contact) +
2D Compatibility (PS) -14824 + (NN) -3122 + (LL) 5620
1D Compatibility (HY) -15600 + (ID) 6900
Total energy: -75547.0 ( -69.12 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2SNS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2SNS-query.scw
PDB file :
Tito_Scwrl_2SNS.pdb
: