Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVNKVIIVEGKSDKKRVQQVIA---EPVNIICTHGTMSIDKLDDMIESLY--DKQVFVLADSDDEG-DRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
1D3Y Chain:A ((122-204))
---ADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEHDLPVLVFTDGDPYGYLNIYRTLK---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1D3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21762 for 441 contacts (-49.3/contact) +
2D Compatibility (PS) -7656 + (NN) -1335 + (LL) 4580
1D Compatibility (HY) -800 + (ID) 550
Total energy: -27523.0 ( -62.41 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_1D3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D3Y-query.scw
PDB file :
Tito_Scwrl_1D3Y.pdb
: