Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE
3SGX Chain:A ((20-238))
--------------------------HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSE-----------LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFAN-----------
General information:
TITO was launched using:
RESULT:
Template:
3SGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103746 for 1564 contacts (-66.3/contact) +
2D Compatibility (PS) -21939 + (NN) -6984 + (LL) 2220
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -150749.0 ( -96.39 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3SGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SGX-query.scw
PDB file :
Tito_Scwrl_3SGX.pdb
: