Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1KQ1 Chain:W ((6-66))
-----NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE-----------
General information:
TITO was launched using:
RESULT:
Template:
1KQ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31091 for 368 contacts (-84.5/contact) +
2D Compatibility (PS) -6744 + (NN) -1686 + (LL) 1136
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -50635.0 ( -137.60 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_1KQ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KQ1-query.scw
PDB file :
Tito_Scwrl_1KQ1.pdb
: