Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3F0V Chain:X ((1-157))
-TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLYEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK-
General information:
TITO was launched using:
RESULT:
Template:
3F0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123262 for 1167 contacts (-105.6/contact) +
2D Compatibility (PS) -16588 + (NN) -2925 + (LL) 272
1D Compatibility (HY) -24000 + (ID) 7800
Total energy: -174303.0 ( -149.36 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3F0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0V-query.scw
PDB file :
Tito_Scwrl_3F0V.pdb
: